[Ocfs2-users] how do I remove ocfs2 orphaned files that are taking up diskspace ?

Srinivas Eeda srinivas.eeda at oracle.com
Fri Feb 27 14:21:50 PST 2009


please run fsck.ocfs2 -f to clean the orphans.

If you can reproduce it at will, can you please enable tracing
debugfs.ocfs2 -l JOURNAL, SUPER, INODE, NAMEI, DLM_GLUE ENTRY EXIT allow

and send us the messages files from all nodes.

thanks,
--Srini

Tim Hughes wrote:
> I am looking for a little help with some orphaned files that are taking up diskspace. 
>
> I deleted a approximately 30 x 1GB mysql-bin-XXXXX.log files from a three node ocfs2 cluster. The files appeared removed from the filesystem but the results of a `df -h /var/lib/mysql` showed that no disk space has been cleared. A `du -sh /var/lib/mysql` on the other hand says that ~ 30GB was removed. 
>
> <snip> 
> [root at host1 mysql]# du -sh /var/lib/mysql 
> 50G /var/lib/mysql 
> [root at host1 mysql]# df -h /var/lib/mysql/ 
> Filesystem Size Used Avail Use% Mounted on 
> /dev/xvdb1 100G 83G 18G 83% /var/lib/mysql 
> [root at host1 mysql]# 
> <snip> 
>
> First thoughts were that mysql was holding the file descriptors open but `lsof` showed nothing. After trying a few other things we discovered that the files were orphans of ocfs2. 
>
> <snip> 
> [root@ host1 ~]# debugfs.ocfs2 -R "ls -l //orphan_dir:0001" /dev/xvdb1 
> 13 drwxr-xr-x 2 0 0 4096 23-Feb-2009 21:54 . 
> 6 drwxr-xr-x 18 0 0 4096 20-Aug-2008 15:54 .. 
> 1064634 -rw-rw---- 0 100 101 1024 5-Sep-2008 14:14 0000000000103eba 
> 1064635 -rw-rw---- 0 100 101 0 5-Sep-2008 14:14 0000000000103ebb 
> 1064633 -rw-rw---- 0 100 101 8554 5-Sep-2008 14:14 0000000000103eb9 
> 1064637 -rw-rw---- 0 100 101 114688 1-Oct-2008 12:33 0000000000103ebd 
> 1064636 -rw-rw---- 0 100 101 8844 1-Oct-2008 11:37 0000000000103ebc 
> 1193689 -rw-rw---- 0 100 101 1073742258 21-Jan-2009 15:18 00000000001236d9 
> 1193690 -rw-rw---- 0 100 101 1073741942 21-Jan-2009 20:10 00000000001236da 
> 1193691 -rw-rw---- 0 100 101 1073743434 22-Jan-2009 14:29 00000000001236db 
> 1193692 -rw-rw---- 0 100 101 1073742303 22-Jan-2009 18:37 00000000001236dc 
> 1193693 -rw-rw---- 0 100 101 1073741875 23-Jan-2009 12:59 00000000001236dd 
> 1193694 -rw-rw---- 0 100 101 1073741973 23-Jan-2009 18:36 00000000001236de 
> 1193695 -rw-rw---- 0 100 101 1073742198 26-Jan-2009 14:05 00000000001236df 
> 1193696 -rw-rw---- 0 100 101 1073742221 26-Jan-2009 20:18 00000000001236e0 
> 1193697 -rw-rw---- 0 100 101 1073742068 27-Jan-2009 14:46 00000000001236e1 
> 1193698 -rw-rw---- 0 100 101 1005225645 28-Jan-2009 00:06 00000000001236e2 
> <snip> 
>
> We have shutdown mysql and tried unmounting and mounting the ocfs2 file system from the node where we deleted the files. This made no difference so we decided to take down the mysql cluster and unmounting the ocfs2 filesystem from all nodes just incase something was for some reason holding these files open that we couldn't find. This didn't clear the space and the orphans were still there. 
>
> Next we unmounted it all again and ran `fsck.ocfs2 /dev/xvdb1` on it with the following results which indicated there was nothing wrong. 
>
> <snip> 
> Checking OCFS2 filesystem in /dev/xvdb1: 
> label: db-store01 
> uuid: 74 c1 14 6c af ee 4e 29 84 e4 c1 7a a8 cc 96 eb 
> number of blocks: 26214047 
> bytes per block: 4096 
> number of clusters: 26214047 
> bytes per cluster: 4096 
> max slots: 16 
>
> /dev/xvdb1 is clean. It will be checked after 20 additional mounts. 
> <snip> 
>
> We are running : 
> ocfs2-tools-1.4.1-1.el5 
> ocfs2-2.6.18-92.1.10.el5xen-1.4.1-1.el5 
>
> with kernel 2.6.18-92.1.10.el5xen on RHEL5 
>
>
> How do we reclaim this space ? 
>
>
>
> Tim Hughes 
>
> www.tradefair.com 
>
> Tradefair | Level 2, Yellow Building | 1 Nicholas Road | London | W11 4AN 
>
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